\documentclass{jobim2009}
%\usepackage{graphicx}
\usepackage[latin1]{inputenc}

\begin{document}
\selectlanguage{english}
\title{Template for the final version of JOBIM 2009 proceedings}
\author{Rémi Houlgatte\inst{1}, Jean-Michel Richer\inst{2}}

% Typeset the title
\institute{Institut du thorax, UMR 915 INSERM\\ 
1, rue Gaston Veil BP 53508 44035 Nantes Cedex 1 France \\\email{Remi.Houlgatte@univ-nantes.fr}
\and
Laboratoire d'Etudes et de Recherche en Informatique d'Angers\\
Faculté des Sciences, 2 Boulevard Lavoisier 49045 Angers Cedex France
\\\email{jean-michel.richer@univ-angers.fr}
}
\maketitle
\selectlanguage{english}
\begin{abstract}
\textit{The abstract of the paper must be in italic, with Times New Roman 11-point
fonts.}
\end{abstract}
\begin{keywords}
Genomics, databases, lateral gene transfer.
\end{keywords}


%si voue écrivez en français decommenter la ligne suivante...
%\selectlanguage{francais}

\section{Introduction}
This is the \LaTeX template for JOBIM 2009 proceedings. Please do
not modify or alter in any way the style sheets provided in this
document. Use Helvetica bold 14-point fonts for the title, Times New
Roman 11-point for the name(s) of the author(s) and the keywords,
Times New Roman 10-point for the address(es), and Courier 10-point
for the email(s).  

For the main text, use Times New Roman 11-point
type and 6-point spacing between paragraphs. Italics may be used to
emphasize words in running text. 
With these sizes, the interline distance should be set so
that around 50 lines occur on a full-text page.  

If you write your text in french, please type: 
\begin{verbatim}
\selectlanguage{francais}
\end{verbatim}


\section{Document Structure (Helvetica 12-point type, Bold)}
\subsection{Headings and Sub-headings (Helvetica 11-point type, Bold)}

First, second (and if required third) level headings should be
capitalized (\emph{i.e.}, nouns, verbs, and all other words except articles,
prepositions, and conjunctions should be set with an initial capital)
and should, with the exception of the title, be aligned to the
left. You have to use the numbering style given in this template
(\emph{i.e.}, 2.1., 2.2., etc.). For the First level use Helvetica
12-point type, Bold, for the second level and if required the third
use Helvetica 11-point type, Bold.


\subsection{Page Numbering}
Pages must NOT be numbered. Final pagination will be set by the
editors of the proceedings.

\subsection{Figures and Photographs}
Please produce your figures in black and white, and integrate them
into your text file. Please note that no figure will be taken in
account if not integrated in your text file. 

Check that in line drawings, lines are not interrupted and have
constant width. Grids and details within the figures must be clearly
readable and may not be written one on top of the other. Line drawings
should have a resolution of at least 600 dpi (preferably 1200 dpi).The
lettering in figures should have a height of 2 mm (11-point type).
Figures should be numbered and should have a caption which should
always be positioned under the figures. The final sentence of a
caption should end with a period. Please center the captions between
the margins and set them in Times New Roman 10-point font (Fig. 1
shows an example).  The distance between text and figure should be 18
points, the distance between figure and caption should be 12 points.
Again, if you use the style sheets provided in this file, everything
should be okay (a style is provided for the figures too).

\begin{figure}
\begin{center}
\setlength{\unitlength}{5mm}
%if you have pdflatex installed, you can use pdf files as graphics
% \includegraphics[height=6cm,width=4cm]{figs/fig1.pdf}
 %On the ther hand, you must use epf files
%\includegraphics[height=4.04cm,width=6.67cm]{figs/fig1.eps}
\end{center}
\caption{Old JOBIM puzzle (end of the 20th century).}
\label{fig1}
\end{figure}

To ensure that the reproduction of your illustrations is of reasonable
quality we advise you not to use any colors. The contrast should be as
pronounced as possible. This particularly applies for screenshots.

\subsection{Tables}
Table content should be in Times New Roman 10-point font as well as their
captions. The rules used for the figures are also applied for the tables (see
Table \ref{tab1} for example). Please note that no table will be taken
in account if not integrated in your text file. 

\begin{table}[ht]
\begin{center}
\begin{tabular}{lcccccc}
 \hline
 & Col.1 & Col.2 & Col.3 & Col.4 & Col.5 & Col.6\\
 \hline
Row 1 \\
Row 2 \\
Row 3 \\
Row 4 \\
\hline
\end{tabular}
\end{center}
\caption{Example of a plain, dull, ordinary table for JOBIM.}
\label{tab1}
\end{table}

\section{Citations}

The list of references is headed \textit{References}, it should be placed at the
end of your contribution.  It should be in Times New Roman 10-point font. Please
do not insert a page break before the list of references  if the page is not completely
filled. For citations in the text, please use square brackets \cite{perriere} and
consecutive numbers \cite{bushman}\cite{daubin} in list of references. Here are
examples on how to format references corresponding to articles \cite{perriere},
books \cite{bushman}, book chapters and proceedings \cite{daubin}.

\section*{Acknowledgements}
This work is supported by JOBIM 2009.

\begin{thebibliography}{99}

\bibitem{perriere}G. Perri\`{e}re, C. Combet, S. Penel, C. Blanchet, J. Thioulouse,
C. Geourjon, J. Grassot, C. Charavay, M. Gouy, L. Duret and G. Del\'{e}age,
Integrated databanks access and sequence/structure analysis services at the
PBIL. \textit{Nucleic Acids Res.}, 31:3393-3399, 2003.

\bibitem{bushman}F. Bushman, \textit{Lateral DNA Transfer, Mechanisms and
Consequences}, Cold Spring Harbor Laboratory Press, New York, 2002.

\bibitem{daubin}V. Daubin, M. Gouy and G. Perri\`{e}re, Bacterial molecular
phylogeny using supertree approach, in H. Matsuda, L. Wong, S. Miyano and
T. Takagi (eds.), \textit{Proceedings of the 12th International Conference on
Genome Informatics}, Universal Academy Press, Tokyo, pp. 155-164, 2001.

\end{thebibliography}
\end{document}